Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEBP20929 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEBP20929 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC5.2□□□□□ -1.58
NEBP20929 CCNB3P1-201ENST00000504855 1431 ntBASIC5.2□□□□□ -1.58
NEBP20929 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC5.2□□□□□ -1.58
NEBP20929 NAA40-205ENST00000539656 577 ntTSL 4 BASIC5.2□□□□□ -1.58
NEBP20929 BEST3-210ENST00000551160 721 ntTSL 3 BASIC5.2□□□□□ -1.58
NEBP20929 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEBP20929 MEG8_2.1-201ENST00000610604 122 ntBASIC5.2□□□□□ -1.58
NEBP20929 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC5.2□□□□□ -1.58
NEBP20929 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEBP20929 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC5.2□□□□□ -1.58
NEBP20929 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC5.2□□□□□ -1.58
NEBP20929 SPATA22-204ENST00000541913 1683 ntTSL 2 BASIC5.2□□□□□ -1.58
NEBP20929 AL662907.1-201ENST00000622988 1360 ntBASIC5.19□□□□□ -1.58
NEBP20929 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 AC005549.1-201ENST00000579438 1629 ntBASIC5.19□□□□□ -1.58
NEBP20929 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 STK16-202ENST00000409260 1493 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 SPATA32-201ENST00000331780 1284 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NEBP20929 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 FTLP2-201ENST00000431458 528 ntBASIC5.19□□□□□ -1.58
NEBP20929 Z93242.2-201ENST00000445666 394 ntBASIC5.19□□□□□ -1.58
NEBP20929 SLC25A51P3-201ENST00000521814 889 ntBASIC5.19□□□□□ -1.58
NEBP20929 AC010761.2-201ENST00000584779 442 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 AC211476.2-201ENST00000608799 708 ntBASIC5.19□□□□□ -1.58
NEBP20929 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NEBP20929 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 LST1-206ENST00000376090 689 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LST1-210ENST00000376099 610 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LST1-214ENST00000418507 726 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC5.19□□□□□ -1.58
NEBP20929 LINC00158-203ENST00000440205 740 ntTSL 3 BASIC5.19□□□□□ -1.58
NEBP20929 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 RN7SL521P-201ENST00000488398 297 ntBASIC5.19□□□□□ -1.58
NEBP20929 CLCF1-202ENST00000533438 967 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC5.19□□□□□ -1.58
NEBP20929 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 AC013726.1-201ENST00000563747 2285 ntBASIC5.19□□□□□ -1.58
NEBP20929 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 HLA-DQA1-202ENST00000374949 1060 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NEBP20929 SHC3-201ENST00000375831 569 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
NEBP20929 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC5.19□□□□□ -1.58
NEBP20929 RPL17P3-201ENST00000605695 525 ntBASIC5.19□□□□□ -1.58
NEBP20929 AC027612.1-201ENST00000445234 2395 ntBASIC5.19□□□□□ -1.58
NEBP20929 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 AP001267.2-201ENST00000532619 2086 ntBASIC5.19□□□□□ -1.58
NEBP20929 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC5.19□□□□□ -1.58
NEBP20929 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 LGALS14-202ENST00000392052 774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 AL079352.1-201ENST00000547237 1042 ntBASIC5.19□□□□□ -1.58
NEBP20929 AC106782.3-201ENST00000563429 258 ntBASIC5.19□□□□□ -1.58
NEBP20929 AC006435.3-201ENST00000611041 203 ntBASIC5.19□□□□□ -1.58
NEBP20929 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NEBP20929 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LINC00528-201ENST00000600723 2160 ntBASIC5.19□□□□□ -1.58
NEBP20929 AC084364.1-201ENST00000551967 1556 ntBASIC5.19□□□□□ -1.58
NEBP20929 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC5.19□□□□□ -1.58
NEBP20929 AC025752.1-201ENST00000503317 558 ntTSL 4 BASIC5.19□□□□□ -1.58
NEBP20929 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEBP20929 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC5.19□□□□□ -1.58
NEBP20929 LINC01298-201ENST00000523171 519 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms