Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
DEFA4P12838 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
DEFA4P12838 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA4P12838 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.12□□□□□ -0.47
DEFA4P12838 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.12□□□□□ -0.47
DEFA4P12838 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
DEFA4P12838 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 MBLAC2-202ENST00000514906 1936 ntBASIC12.11□□□□□ -0.47
DEFA4P12838 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.11□□□□□ -0.47
DEFA4P12838 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.11□□□□□ -0.47
DEFA4P12838 MEP1AP4-201ENST00000423244 1087 ntBASIC12.11□□□□□ -0.47
DEFA4P12838 TSSK5P-201ENST00000423978 907 ntBASIC12.11□□□□□ -0.47
DEFA4P12838 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.11□□□□□ -0.47
DEFA4P12838 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.11□□□□□ -0.47
DEFA4P12838 SAMD11P1-201ENST00000571429 661 ntBASIC12.11□□□□□ -0.47
DEFA4P12838 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.11□□□□□ -0.47
DEFA4P12838 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.11□□□□□ -0.47
DEFA4P12838 AL158212.4-201ENST00000624062 1286 ntBASIC12.11□□□□□ -0.47
DEFA4P12838 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.11□□□□□ -0.47
DEFA4P12838 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
DEFA4P12838 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.11□□□□□ -0.47
DEFA4P12838 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DEFA4P12838 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
DEFA4P12838 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.11□□□□□ -0.47
DEFA4P12838 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
DEFA4P12838 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
DEFA4P12838 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.1□□□□□ -0.47
DEFA4P12838 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.1□□□□□ -0.47
DEFA4P12838 INGX-202ENST00000489074 768 ntBASIC12.1□□□□□ -0.47
DEFA4P12838 AC104596.2-201ENST00000512793 793 ntBASIC12.1□□□□□ -0.47
DEFA4P12838 DOC2GP-202ENST00000514950 1163 ntBASIC12.1□□□□□ -0.47
DEFA4P12838 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.1□□□□□ -0.47
DEFA4P12838 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.1□□□□□ -0.47
DEFA4P12838 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms