Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
LAMP1P11279 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.02□□□□□ -0.17
LAMP1P11279 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LAMP1P11279 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
LAMP1P11279 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LAMP1P11279 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.01□□□□□ -0.17
LAMP1P11279 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.01□□□□□ -0.17
LAMP1P11279 AL391280.1-201ENST00000506969 1062 ntBASIC14.01□□□□□ -0.17
LAMP1P11279 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.01□□□□□ -0.17
LAMP1P11279 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.01□□□□□ -0.17
LAMP1P11279 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.01□□□□□ -0.17
LAMP1P11279 MIR6074-201ENST00000612054 107 ntBASIC14.01□□□□□ -0.17
LAMP1P11279 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.01□□□□□ -0.17
LAMP1P11279 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LAMP1P11279 AC139712.1-201ENST00000378256 1875 ntBASIC14.01□□□□□ -0.17
LAMP1P11279 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.01□□□□□ -0.17
LAMP1P11279 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.01□□□□□ -0.17
LAMP1P11279 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LAMP1P11279 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14□□□□□ -0.17
LAMP1P11279 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14□□□□□ -0.17
LAMP1P11279 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14□□□□□ -0.17
LAMP1P11279 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 TDH-203ENST00000531764 1110 ntBASIC14□□□□□ -0.17
LAMP1P11279 PTP4A1P2-201ENST00000546033 454 ntBASIC14□□□□□ -0.17
LAMP1P11279 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14□□□□□ -0.17
LAMP1P11279 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14□□□□□ -0.17
LAMP1P11279 MIR5189-201ENST00000577370 114 ntBASIC14□□□□□ -0.17
LAMP1P11279 RN7SL48P-201ENST00000579283 293 ntBASIC14□□□□□ -0.17
LAMP1P11279 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14□□□□□ -0.17
LAMP1P11279 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LAMP1P11279 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14□□□□□ -0.17
LAMP1P11279 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LAMP1P11279 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms