Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 AC005225.4-201ENST00000557330 545 ntBASIC15.29■□□□□ 0.04
CD48P09326 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.29■□□□□ 0.04
CD48P09326 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.29■□□□□ 0.04
CD48P09326 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 AC002472.3-201ENST00000640124 621 ntBASIC15.29■□□□□ 0.04
CD48P09326 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 HSPA8P5-201ENST00000456928 2069 ntBASIC15.28■□□□□ 0.04
CD48P09326 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 AC006001.1-201ENST00000325130 474 ntBASIC15.28■□□□□ 0.04
CD48P09326 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CD48P09326 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 MIR1202-201ENST00000408529 83 ntBASIC15.28■□□□□ 0.04
CD48P09326 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.28■□□□□ 0.04
CD48P09326 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.28■□□□□ 0.04
CD48P09326 COX5BP1-201ENST00000507622 393 ntBASIC15.28■□□□□ 0.04
CD48P09326 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.28■□□□□ 0.04
CD48P09326 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 MST1P2-201ENST00000457982 2291 ntBASIC15.28■□□□□ 0.04
CD48P09326 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.28■□□□□ 0.04
CD48P09326 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.28■□□□□ 0.04
CD48P09326 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD48P09326 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 AC020910.6-201ENST00000623084 1459 ntBASIC15.27■□□□□ 0.04
CD48P09326 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.27■□□□□ 0.04
CD48P09326 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.27■□□□□ 0.04
CD48P09326 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CD48P09326 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 CD8B2-202ENST00000417670 633 ntBASIC15.27■□□□□ 0.04
CD48P09326 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms