Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM2P07951 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM2P07951 AC011700.1-201ENST00000610409 2627 ntBASIC16.92■□□□□ 0.3
TPM2P07951 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM2P07951 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TPM2P07951 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM2P07951 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM2P07951 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM2P07951 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM2P07951 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM2P07951 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM2P07951 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TPM2P07951 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM2P07951 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM2P07951 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM2P07951 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
TPM2P07951 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM2P07951 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TPM2P07951 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
TPM2P07951 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 HLA-V-204ENST00000476601 1289 ntBASIC16.91■□□□□ 0.3
TPM2P07951 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM2P07951 AL671883.3-201ENST00000603274 991 ntBASIC16.91■□□□□ 0.3
TPM2P07951 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM2P07951 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
TPM2P07951 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 AP002761.4-201ENST00000565433 3361 ntBASIC16.91■□□□□ 0.3
TPM2P07951 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TPM2P07951 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM2P07951 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.9■□□□□ 0.3
TPM2P07951 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 AC023794.5-201ENST00000564380 2157 ntBASIC16.9■□□□□ 0.3
TPM2P07951 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 RPSAP43-201ENST00000402237 625 ntBASIC16.9■□□□□ 0.3
TPM2P07951 KRT18P64-201ENST00000434946 1219 ntBASIC16.9■□□□□ 0.3
TPM2P07951 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM2P07951 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM2P07951 AC069262.1-201ENST00000539058 672 ntBASIC16.9■□□□□ 0.3
TPM2P07951 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
TPM2P07951 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM2P07951 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM2P07951 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM2P07951 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 AL121723.1-201ENST00000445194 1519 ntBASIC16.9■□□□□ 0.3
TPM2P07951 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM2P07951 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM2P07951 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms