Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSBP07858 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 AC113367.3-201ENST00000508316 1912 ntBASIC13.9□□□□□ -0.18
CTSBP07858 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTSBP07858 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CTSBP07858 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CTSBP07858 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.9□□□□□ -0.18
CTSBP07858 KRT18P36-201ENST00000411618 1276 ntBASIC13.9□□□□□ -0.18
CTSBP07858 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSBP07858 AC011742.3-201ENST00000439053 820 ntBASIC13.9□□□□□ -0.18
CTSBP07858 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSBP07858 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.9□□□□□ -0.18
CTSBP07858 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CTSBP07858 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSBP07858 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSBP07858 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSBP07858 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.9□□□□□ -0.18
CTSBP07858 RN7SL574P-201ENST00000581512 297 ntBASIC13.9□□□□□ -0.18
CTSBP07858 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.9□□□□□ -0.18
CTSBP07858 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CTSBP07858 AL157813.1-201ENST00000612996 587 ntBASIC13.9□□□□□ -0.18
CTSBP07858 AP000346.4-201ENST00000614827 381 ntBASIC13.9□□□□□ -0.18
CTSBP07858 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.9□□□□□ -0.18
CTSBP07858 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
CTSBP07858 AC138627.1-207ENST00000641560 1006 ntBASIC13.9□□□□□ -0.18
CTSBP07858 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSBP07858 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSBP07858 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSBP07858 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSBP07858 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSBP07858 AC103702.1-201ENST00000548801 2630 ntBASIC13.9□□□□□ -0.18
CTSBP07858 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CTSBP07858 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSBP07858 MYADML-201ENST00000474610 2147 ntBASIC13.9□□□□□ -0.18
CTSBP07858 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTSBP07858 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSBP07858 AC018629.1-201ENST00000623381 1736 ntBASIC13.9□□□□□ -0.18
CTSBP07858 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CTSBP07858 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CTSBP07858 AC009093.10-201ENST00000641956 1442 ntBASIC13.9□□□□□ -0.19
CTSBP07858 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 AC068587.6-202ENST00000641839 5619 ntBASIC13.89□□□□□ -0.19
CTSBP07858 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSBP07858 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 RN7SKP214-201ENST00000364208 315 ntBASIC13.89□□□□□ -0.19
CTSBP07858 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSBP07858 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CTSBP07858 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 AC012618.1-201ENST00000461223 412 ntBASIC13.89□□□□□ -0.19
CTSBP07858 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSBP07858 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSBP07858 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.89□□□□□ -0.19
CTSBP07858 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSBP07858 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSBP07858 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CTSBP07858 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms