Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 AC023141.5-201ENST00000458585 616 ntBASIC16.63■□□□□ 0.25
TPM3P06753 HLA-V-204ENST00000476601 1289 ntBASIC16.63■□□□□ 0.25
TPM3P06753 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.63■□□□□ 0.25
TPM3P06753 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM3P06753 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.63■□□□□ 0.25
TPM3P06753 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TPM3P06753 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.63■□□□□ 0.25
TPM3P06753 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TPM3P06753 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM3P06753 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TPM3P06753 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM3P06753 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM3P06753 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM3P06753 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 CES1P1-201ENST00000421606 1704 ntBASIC16.62■□□□□ 0.25
TPM3P06753 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 AC011840.2-201ENST00000563063 1520 ntBASIC16.62■□□□□ 0.25
TPM3P06753 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM3P06753 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.62■□□□□ 0.25
TPM3P06753 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.62■□□□□ 0.25
TPM3P06753 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.62■□□□□ 0.25
TPM3P06753 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.62■□□□□ 0.25
TPM3P06753 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.62■□□□□ 0.25
TPM3P06753 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM3P06753 AL137783.1-201ENST00000623494 1896 ntBASIC16.62■□□□□ 0.25
TPM3P06753 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM3P06753 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM3P06753 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM3P06753 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 RN7SL832P-201ENST00000607781 1756 ntBASIC16.61■□□□□ 0.25
TPM3P06753 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TPM3P06753 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TPM3P06753 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TPM3P06753 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.61■□□□□ 0.25
TPM3P06753 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.61■□□□□ 0.25
TPM3P06753 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM3P06753 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TPM3P06753 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TPM3P06753 AL645937.2-201ENST00000396808 931 ntBASIC16.61■□□□□ 0.25
TPM3P06753 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.61■□□□□ 0.25
TPM3P06753 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.61■□□□□ 0.25
TPM3P06753 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.61■□□□□ 0.25
TPM3P06753 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM3P06753 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms