Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 BX640514.1-201ENST00000583223 1918 ntBASIC13.55□□□□□ -0.24
HIST1H2ABP04908 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.55□□□□□ -0.24
HIST1H2ABP04908 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 TPT1P11-201ENST00000458482 498 ntBASIC13.55□□□□□ -0.24
HIST1H2ABP04908 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 AC140912.1-201ENST00000577171 1054 ntBASIC13.55□□□□□ -0.24
HIST1H2ABP04908 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 AC008494.3-201ENST00000606615 944 ntBASIC13.55□□□□□ -0.24
HIST1H2ABP04908 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 SALL4P5-201ENST00000419001 1760 ntBASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST1H2ABP04908 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 TLE1P1-201ENST00000422965 589 ntBASIC13.54□□□□□ -0.24
HIST1H2ABP04908 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST1H2ABP04908 ELK1P1-201ENST00000485699 580 ntBASIC13.54□□□□□ -0.24
HIST1H2ABP04908 AC026434.2-201ENST00000506094 1078 ntBASIC13.54□□□□□ -0.24
HIST1H2ABP04908 AC022447.6-201ENST00000515522 438 ntBASIC13.54□□□□□ -0.24
HIST1H2ABP04908 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms