Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
GAPDHP04406 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.44□□□□□ -0.42
GAPDHP04406 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.44□□□□□ -0.42
GAPDHP04406 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.44□□□□□ -0.42
GAPDHP04406 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.44□□□□□ -0.42
GAPDHP04406 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.44□□□□□ -0.42
GAPDHP04406 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GAPDHP04406 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GAPDHP04406 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.43□□□□□ -0.42
GAPDHP04406 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 AC007787.1-201ENST00000588095 1583 ntBASIC12.43□□□□□ -0.42
GAPDHP04406 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
GAPDHP04406 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 MIR661-201ENST00000384842 89 ntBASIC12.43□□□□□ -0.42
GAPDHP04406 HMGN1P19-201ENST00000436976 333 ntBASIC12.43□□□□□ -0.42
GAPDHP04406 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 API5-211ENST00000534695 560 ntTSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.43□□□□□ -0.42
GAPDHP04406 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.43□□□□□ -0.42
GAPDHP04406 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 AC027307.3-201ENST00000594262 1100 ntBASIC12.43□□□□□ -0.42
GAPDHP04406 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 CHCHD2P3-201ENST00000603038 451 ntBASIC12.43□□□□□ -0.42
GAPDHP04406 BX539320.1-201ENST00000623759 877 ntBASIC12.43□□□□□ -0.42
GAPDHP04406 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GAPDHP04406 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GAPDHP04406 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
GAPDHP04406 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.42□□□□□ -0.42
GAPDHP04406 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 AC073548.1-201ENST00000624088 1882 ntBASIC12.42□□□□□ -0.42
GAPDHP04406 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.42□□□□□ -0.42
GAPDHP04406 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.42□□□□□ -0.42
GAPDHP04406 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
GAPDHP04406 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.42□□□□□ -0.42
GAPDHP04406 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GAPDHP04406 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms