Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 AP002761.4-201ENST00000565433 3361 ntBASIC12.45□□□□□ -0.42
CD74P04233 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 DRD5P1-201ENST00000456605 1438 ntBASIC12.45□□□□□ -0.42
CD74P04233 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.45□□□□□ -0.42
CD74P04233 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.44□□□□□ -0.42
CD74P04233 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD74P04233 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.44□□□□□ -0.42
CD74P04233 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CD74P04233 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.44□□□□□ -0.42
CD74P04233 AP000347.1-202ENST00000435868 847 ntBASIC12.44□□□□□ -0.42
CD74P04233 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.44□□□□□ -0.42
CD74P04233 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.44□□□□□ -0.42
CD74P04233 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.44□□□□□ -0.42
CD74P04233 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.44□□□□□ -0.42
CD74P04233 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.44□□□□□ -0.42
CD74P04233 AC131206.1-201ENST00000538078 1211 ntBASIC12.44□□□□□ -0.42
CD74P04233 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.44□□□□□ -0.42
CD74P04233 MIR6080-201ENST00000617359 66 ntBASIC12.44□□□□□ -0.42
CD74P04233 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.44□□□□□ -0.42
CD74P04233 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CD74P04233 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD74P04233 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD74P04233 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 ELL2P1-201ENST00000413990 1906 ntBASIC12.43□□□□□ -0.42
CD74P04233 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms