Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA1P02708 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA1P02708 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CHRNA1P02708 MIR4649-201ENST00000582839 64 ntBASIC15.9■□□□□ 0.14
CHRNA1P02708 AP001065.2-201ENST00000617205 644 ntBASIC15.9■□□□□ 0.14
CHRNA1P02708 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA1P02708 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 AC022532.1-201ENST00000624563 1728 ntBASIC15.9■□□□□ 0.14
CHRNA1P02708 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA1P02708 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
CHRNA1P02708 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA1P02708 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA1P02708 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA1P02708 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA1P02708 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.89■□□□□ 0.13
CHRNA1P02708 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA1P02708 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.89■□□□□ 0.13
CHRNA1P02708 AC025262.2-201ENST00000623975 1056 ntBASIC15.89■□□□□ 0.13
CHRNA1P02708 AP001184.1-201ENST00000637936 376 ntBASIC15.89■□□□□ 0.13
CHRNA1P02708 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA1P02708 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CHRNA1P02708 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA1P02708 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 AC079112.1-201ENST00000454972 939 ntBASIC15.88■□□□□ 0.13
CHRNA1P02708 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA1P02708 AC027237.1-201ENST00000560942 655 ntBASIC15.88■□□□□ 0.13
CHRNA1P02708 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA1P02708 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA1P02708 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA1P02708 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA1P02708 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.88■□□□□ 0.13
CHRNA1P02708 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA1P02708 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 MARK2P16-201ENST00000605714 1723 ntBASIC15.88■□□□□ 0.13
CHRNA1P02708 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA1P02708 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA1P02708 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms