Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLDN9O95484 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN9O95484 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN9O95484 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN9O95484 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN9O95484 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN9O95484 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN9O95484 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 AC005229.1-201ENST00000392885 409 ntBASIC14.3□□□□□ -0.12
CLDN9O95484 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN9O95484 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN9O95484 RN7SL837P-201ENST00000463010 287 ntBASIC14.3□□□□□ -0.12
CLDN9O95484 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 AL391280.1-201ENST00000506969 1062 ntBASIC14.3□□□□□ -0.12
CLDN9O95484 ALG3P1-201ENST00000508806 1114 ntBASIC14.3□□□□□ -0.12
CLDN9O95484 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.3□□□□□ -0.12
CLDN9O95484 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN9O95484 AC025279.2-201ENST00000569730 653 ntBASIC14.3□□□□□ -0.12
CLDN9O95484 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN9O95484 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN9O95484 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN9O95484 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN9O95484 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN9O95484 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN9O95484 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
CLDN9O95484 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN9O95484 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 AC016397.2-201ENST00000624848 1985 ntBASIC14.29□□□□□ -0.12
CLDN9O95484 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN9O95484 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 RN7SKP175-201ENST00000408472 289 ntBASIC14.29□□□□□ -0.12
CLDN9O95484 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN9O95484 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN9O95484 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN9O95484 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN9O95484 AC015936.2-201ENST00000593177 259 ntBASIC14.29□□□□□ -0.12
CLDN9O95484 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN9O95484 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 AC025048.6-201ENST00000634326 1161 ntBASIC14.29□□□□□ -0.12
CLDN9O95484 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN9O95484 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN9O95484 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN9O95484 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms