Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 AL109954.1-202ENST00000564051 2148 ntBASIC14.29□□□□□ -0.12
CPNE3O75131 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE3O75131 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.28□□□□□ -0.12
CPNE3O75131 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE3O75131 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 AP003171.2-201ENST00000528208 925 ntBASIC14.28□□□□□ -0.12
CPNE3O75131 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.28□□□□□ -0.12
CPNE3O75131 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CPNE3O75131 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPNE3O75131 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPNE3O75131 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.27□□□□□ -0.12
CPNE3O75131 AC087386.2-201ENST00000623212 4637 ntBASIC14.27□□□□□ -0.12
CPNE3O75131 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.27□□□□□ -0.12
CPNE3O75131 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPNE3O75131 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.27□□□□□ -0.12
CPNE3O75131 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CPNE3O75131 FKBP4P6-201ENST00000457486 1332 ntBASIC14.27□□□□□ -0.12
CPNE3O75131 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE3O75131 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.27□□□□□ -0.13
CPNE3O75131 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 HIST2H2BB-201ENST00000449108 381 ntBASIC14.27□□□□□ -0.13
CPNE3O75131 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.27□□□□□ -0.13
CPNE3O75131 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 SCARNA20.5-201ENST00000516991 142 ntBASIC14.27□□□□□ -0.13
CPNE3O75131 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.27□□□□□ -0.13
CPNE3O75131 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.27□□□□□ -0.13
CPNE3O75131 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE3O75131 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CPNE3O75131 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CPNE3O75131 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CPNE3O75131 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE3O75131 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CPNE3O75131 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.27□□□□□ -0.13
CPNE3O75131 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms