Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.32■□□□□ 0.04
MSI1O43347 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MSI1O43347 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.32■□□□□ 0.04
MSI1O43347 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MSI1O43347 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 CICP4-201ENST00000447359 2812 ntBASIC15.31■□□□□ 0.04
MSI1O43347 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
MSI1O43347 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.31■□□□□ 0.04
MSI1O43347 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.31■□□□□ 0.04
MSI1O43347 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 AC044849.1-201ENST00000519737 1188 ntBASIC15.31■□□□□ 0.04
MSI1O43347 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.31■□□□□ 0.04
MSI1O43347 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.31■□□□□ 0.04
MSI1O43347 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
MSI1O43347 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 AC005962.1-201ENST00000584100 773 ntBASIC15.31■□□□□ 0.04
MSI1O43347 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.31■□□□□ 0.04
MSI1O43347 AC022748.3-201ENST00000621828 275 ntBASIC15.31■□□□□ 0.04
MSI1O43347 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.31■□□□□ 0.04
MSI1O43347 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
MSI1O43347 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MSI1O43347 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.3■□□□□ 0.04
MSI1O43347 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MSI1O43347 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.3■□□□□ 0.04
MSI1O43347 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 GPAA1P2-201ENST00000417923 928 ntBASIC15.3■□□□□ 0.04
MSI1O43347 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 AC004898.1-201ENST00000451057 766 ntBASIC15.3■□□□□ 0.04
MSI1O43347 AC126915.1-201ENST00000522847 1038 ntBASIC15.3■□□□□ 0.04
MSI1O43347 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MSI1O43347 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MSI1O43347 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.3■□□□□ 0.04
MSI1O43347 AC103988.2-201ENST00000561804 725 ntBASIC15.3■□□□□ 0.04
MSI1O43347 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms