Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHL1O00533 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHL1O00533 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.74■□□□□ 0.59
CHL1O00533 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHL1O00533 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHL1O00533 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.74■□□□□ 0.59
CHL1O00533 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHL1O00533 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHL1O00533 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHL1O00533 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHL1O00533 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
CHL1O00533 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CHL1O00533 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.73■□□□□ 0.59
CHL1O00533 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 RN7SL769P-201ENST00000469386 295 ntBASIC18.73■□□□□ 0.59
CHL1O00533 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.73■□□□□ 0.59
CHL1O00533 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 AC242376.1-201ENST00000559033 726 ntBASIC18.73■□□□□ 0.59
CHL1O00533 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.73■□□□□ 0.59
CHL1O00533 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.73■□□□□ 0.59
CHL1O00533 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.73■□□□□ 0.59
CHL1O00533 AC106872.11-201ENST00000605838 421 ntBASIC18.73■□□□□ 0.59
CHL1O00533 AC021016.3-201ENST00000608367 477 ntBASIC18.73■□□□□ 0.59
CHL1O00533 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHL1O00533 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.73■□□□□ 0.59
CHL1O00533 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.73■□□□□ 0.59
CHL1O00533 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHL1O00533 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHL1O00533 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHL1O00533 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 AC005912.2-201ENST00000619492 2400 ntBASIC18.72■□□□□ 0.59
CHL1O00533 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.72■□□□□ 0.59
CHL1O00533 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.72■□□□□ 0.59
CHL1O00533 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.72■□□□□ 0.59
CHL1O00533 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 AL133466.1-201ENST00000447582 150 ntBASIC18.72■□□□□ 0.59
CHL1O00533 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.72■□□□□ 0.59
CHL1O00533 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.72■□□□□ 0.59
CHL1O00533 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.72■□□□□ 0.59
CHL1O00533 AC245884.6-201ENST00000515672 1067 ntBASIC18.72■□□□□ 0.59
CHL1O00533 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.72■□□□□ 0.59
CHL1O00533 AL022334.2-201ENST00000610000 484 ntBASIC18.72■□□□□ 0.59
CHL1O00533 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 AC015909.3-201ENST00000572855 1794 ntBASIC18.72■□□□□ 0.59
CHL1O00533 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHL1O00533 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHL1O00533 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.72■□□□□ 0.59
CHL1O00533 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CHL1O00533 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHL1O00533 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.71■□□□□ 0.59
CHL1O00533 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms