Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.9□□□□□ -0.34
BOLA2-SMG1P6H3BVE0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.9□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.9□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KIF28P-202ENST00000504864 3064 ntBASIC12.9□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.9□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC091607.1-201ENST00000490318 1060 ntBASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TPSP2-201ENST00000561760 610 ntBASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AP005901.3-202ENST00000581653 237 ntBASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC011467.2-201ENST00000598425 242 ntBASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC091076.1-201ENST00000610741 619 ntBASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC084364.1-201ENST00000551967 1556 ntBASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 EGLN3-205ENST00000547327 2849 ntBASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.88□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms