Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
LINC00473A8K010 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.05□□□□□ -0.48
LINC00473A8K010 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
LINC00473A8K010 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
LINC00473A8K010 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00473A8K010 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 HSPA8P5-201ENST00000456928 2069 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LINC00473A8K010 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00473A8K010 POM121L8P-201ENST00000417732 1281 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 POM121L9P-203ENST00000441984 1285 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00473A8K010 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00473A8K010 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 MESTP3-201ENST00000503460 968 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 AC103988.2-201ENST00000561804 725 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 AC009486.1-201ENST00000569860 813 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00473A8K010 RN7SL204P-201ENST00000582831 262 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.04□□□□□ -0.48
LINC00473A8K010 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.04□□□□□ -0.48
LINC00473A8K010 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 TCAM1P-207ENST00000485295 1537 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.04□□□□□ -0.48
LINC00473A8K010 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC00473A8K010 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
LINC00473A8K010 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC00473A8K010 AC139712.1-201ENST00000378256 1875 ntBASIC12.04□□□□□ -0.48
LINC00473A8K010 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00473A8K010 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00473A8K010 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00473A8K010 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LINC00473A8K010 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
LINC00473A8K010 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00473A8K010 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00473A8K010 KHSRPP1-201ENST00000427983 1768 ntBASIC12.03□□□□□ -0.48
LINC00473A8K010 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms