Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AL138799.1-201ENST00000448213 1675 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AC026434.2-201ENST00000506094 1078 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AC073862.5-201ENST00000624129 2027 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 PCDHB19P-202ENST00000625133 2914 ntBASIC10.38□□□□□ -0.75
LINC01546A6NGU7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AL138725.1-201ENST00000407347 1314 ntBASIC10.38□□□□□ -0.75
LINC01546A6NGU7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AL161932.2-201ENST00000435436 679 ntBASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AL592309.1-201ENST00000443127 649 ntBASIC10.38□□□□□ -0.75
LINC01546A6NGU7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 CR392039.2-201ENST00000623182 509 ntBASIC10.38□□□□□ -0.75
LINC01546A6NGU7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
LINC01546A6NGU7 AC092865.6-201ENST00000642101 219 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms