Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 LINC00554-201ENST00000564841 3011 ntBASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
TRMT13Q9NUP7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 AC090502.4-201ENST00000551714 1386 ntBASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 RN7SL277P-201ENST00000481521 288 ntBASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 AL157792.1-201ENST00000488281 530 ntBASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 AC124068.2-201ENST00000569473 1109 ntBASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 AC139712.1-201ENST00000378256 1875 ntBASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRMT13Q9NUP7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 PAUPAR-201ENST00000630360 2965 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 HLA-DMA-203ENST00000395305 777 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AL354861.1-201ENST00000445213 355 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AC004837.1-201ENST00000446267 564 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AP000911.2-201ENST00000534330 502 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AC141586.1-203ENST00000567242 366 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 RN7SL470P-201ENST00000583069 259 ntBASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.04■□□□□ 0.16
TRMT13Q9NUP7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRMT13Q9NUP7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms