Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 AL354877.1-201ENST00000424412 413 ntBASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 RNA5SP412-201ENST00000516234 123 ntBASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 AL162426.1-201ENST00000624141 743 ntBASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 Z98259.2-201ENST00000641583 609 ntBASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BLOC1S4Q9NUP1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.33■□□□□ 0.21
BLOC1S4Q9NUP1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 AL161932.2-201ENST00000435436 679 ntBASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 RPSAP36-202ENST00000494591 1261 ntBASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 MIR6720-201ENST00000611664 98 ntBASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 AC064801.2-201ENST00000625052 1303 ntBASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BLOC1S4Q9NUP1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms