Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CICP11-201ENST00000434745 2827 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AL133267.1-201ENST00000398220 340 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 RPL7P3-201ENST00000441388 714 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AC026410.3-201ENST00000514280 936 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 BEND3P3-201ENST00000611030 2440 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AC134312.5-201ENST00000568031 1313 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC018892.3-201ENST00000623986 2499 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC092933.1-201ENST00000393644 945 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC099336.1-201ENST00000417053 1171 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 FO681548.1-201ENST00000455617 1132 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC007551.1-201ENST00000457394 519 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC093433.1-201ENST00000458048 571 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 AC093813.1-201ENST00000605066 256 ntBASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAF4Q9BUZ4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms