Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 TPM3P8-201ENST00000330554 643 ntBASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 FAM197Y7-201ENST00000432892 766 ntBASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 YBX1P6-201ENST00000442962 1002 ntBASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 FO681548.1-201ENST00000455617 1132 ntBASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AL590640.2-201ENST00000457038 527 ntBASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AP000812.2-201ENST00000538934 718 ntBASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.51□□□□□ -0.41
PCGF1Q9BSM1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 LINC01230-201ENST00000625222 3017 ntBASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 AC010328.2-201ENST00000597698 1111 ntBASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms