Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 CTBP2P5-201ENST00000454986 1264 ntBASIC13.43□□□□□ -0.26
USB1Q9BQ65 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 AC017076.1-201ENST00000607613 578 ntBASIC13.43□□□□□ -0.26
USB1Q9BQ65 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
USB1Q9BQ65 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
USB1Q9BQ65 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 CNN2P8-201ENST00000421872 913 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 FAM21FP-201ENST00000426241 1131 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 MTATP6P17-201ENST00000431030 672 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AL512637.1-201ENST00000439523 1231 ntBASIC13.42□□□□□ -0.26
USB1Q9BQ65 BLNK-209ENST00000495266 440 ntTSL 5 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.42□□□□□ -0.26
USB1Q9BQ65 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms