Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 RBM8B-201ENST00000555532 525 ntBASIC12.99□□□□□ -0.33
PCNX1Q96RV3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCNX1Q96RV3 LINC00528-201ENST00000600723 2160 ntBASIC12.98□□□□□ -0.33
PCNX1Q96RV3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.98□□□□□ -0.33
PCNX1Q96RV3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.98□□□□□ -0.33
PCNX1Q96RV3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 TSPY25P-201ENST00000429463 745 ntBASIC12.97□□□□□ -0.33
PCNX1Q96RV3 AC026410.1-201ENST00000507366 1101 ntBASIC12.97□□□□□ -0.33
PCNX1Q96RV3 GCOM2-201ENST00000509133 1104 ntBASIC12.97□□□□□ -0.33
PCNX1Q96RV3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 BX088702.1-201ENST00000610784 235 ntBASIC12.97□□□□□ -0.33
PCNX1Q96RV3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 RN7SL258P-201ENST00000478664 300 ntBASIC12.97□□□□□ -0.33
PCNX1Q96RV3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 AC027237.1-201ENST00000560942 655 ntBASIC12.97□□□□□ -0.33
PCNX1Q96RV3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCNX1Q96RV3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms