Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 AC063926.2-201ENST00000623766 1308 ntBASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 MIR1909-201ENST00000411312 80 ntBASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 AC008687.7-202ENST00000637404 953 ntBASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.21■□□□□ 0.03
CSPG4P5Q96PW8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CSPG4P5Q96PW8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC136759.1-202ENST00000530858 2194 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC010141.1-201ENST00000411585 623 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CICP12-201ENST00000455801 843 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC079316.1-201ENST00000548397 411 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 SORD2P-201ENST00000558556 1069 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AP006547.1-201ENST00000563435 692 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC008825.2-201ENST00000603374 718 ntBASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms