Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 BTBD7P1-201ENST00000447253 1453 ntBASIC14.28□□□□□ -0.12
VPS33AQ96AX1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 AC036164.1-201ENST00000570544 333 ntBASIC14.28□□□□□ -0.12
VPS33AQ96AX1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 CICP8-201ENST00000455800 2813 ntBASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 AC131212.3-201ENST00000624087 4219 ntBASIC14.27□□□□□ -0.12
VPS33AQ96AX1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS33AQ96AX1 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AC135586.1-201ENST00000539323 574 ntBASIC14.27□□□□□ -0.13
VPS33AQ96AX1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AC008738.7-201ENST00000609744 511 ntBASIC14.27□□□□□ -0.13
VPS33AQ96AX1 AC004840.1-201ENST00000636359 365 ntBASIC14.27□□□□□ -0.13
VPS33AQ96AX1 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 RN7SL832P-201ENST00000607781 1756 ntBASIC14.27□□□□□ -0.13
VPS33AQ96AX1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS33AQ96AX1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms