Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL590640.2-201ENST00000457038 527 ntBASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AC106820.3-201ENST00000561653 397 ntBASIC13.86□□□□□ -0.19
NUP43Q8NFH3 IGHV3-72-202ENST00000621503 303 ntBASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AP000593.2-201ENST00000542775 1433 ntBASIC13.86□□□□□ -0.19
NUP43Q8NFH3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NUP43Q8NFH3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 RN7SKP175-201ENST00000408472 289 ntBASIC13.85□□□□□ -0.19
NUP43Q8NFH3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 FAM197Y7-201ENST00000432892 766 ntBASIC13.85□□□□□ -0.19
NUP43Q8NFH3 FAM8A4P-201ENST00000435433 1213 ntBASIC13.85□□□□□ -0.19
NUP43Q8NFH3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 BX088702.1-201ENST00000610784 235 ntBASIC13.85□□□□□ -0.19
NUP43Q8NFH3 AC244669.2-201ENST00000612320 853 ntBASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.85□□□□□ -0.19
NUP43Q8NFH3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NUP43Q8NFH3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 GRK6P1-201ENST00000400595 1711 ntBASIC13.84□□□□□ -0.19
NUP43Q8NFH3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 AC009093.2-202ENST00000620513 2079 ntBASIC13.84□□□□□ -0.19
NUP43Q8NFH3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
NUP43Q8NFH3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms