Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 AC099521.3-201ENST00000624251 2938 ntBASIC14.01□□□□□ -0.17
SIMC1Q8NDZ2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 RN7SKP230-201ENST00000365642 335 ntBASIC14□□□□□ -0.17
SIMC1Q8NDZ2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 FAM197Y7-201ENST00000432892 766 ntBASIC14□□□□□ -0.17
SIMC1Q8NDZ2 U91328.1-201ENST00000437528 223 ntBASIC14□□□□□ -0.17
SIMC1Q8NDZ2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 AL391280.1-201ENST00000506969 1062 ntBASIC14□□□□□ -0.17
SIMC1Q8NDZ2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIMC1Q8NDZ2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC003102.2-201ENST00000589195 1469 ntBASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 AC009093.2-202ENST00000620513 2079 ntBASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIMC1Q8NDZ2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms