Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 RN7SL720P-201ENST00000488178 304 ntBASIC16.09■□□□□ 0.17
VPS52Q8N1B4 AC022217.1-201ENST00000521069 738 ntBASIC16.09■□□□□ 0.17
VPS52Q8N1B4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 MIR4683-201ENST00000579659 81 ntBASIC16.09■□□□□ 0.17
VPS52Q8N1B4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 TCAF2P1-201ENST00000291129 2421 ntBASIC16.09■□□□□ 0.17
VPS52Q8N1B4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS52Q8N1B4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VPS52Q8N1B4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AC138969.2-201ENST00000532739 9932 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 DPM3-202ENST00000368399 517 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 GHSR-202ENST00000427970 912 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AC106794.1-201ENST00000506935 792 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AL360270.3-201ENST00000609118 1348 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AP000593.2-201ENST00000542775 1433 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 AC091951.1-201ENST00000512854 2465 ntBASIC16.08■□□□□ 0.16
VPS52Q8N1B4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS52Q8N1B4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AC106881.1-201ENST00000605849 3329 ntBASIC16.07■□□□□ 0.16
VPS52Q8N1B4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AC026748.1-201ENST00000624349 3251 ntBASIC16.07■□□□□ 0.16
VPS52Q8N1B4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS52Q8N1B4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms