Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 AC100850.1-201ENST00000506768 649 ntBASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 AL136301.1-201ENST00000615830 422 ntBASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 MIR6869-201ENST00000619434 62 ntBASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 AC099063.4-201ENST00000641099 1602 ntBASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SCUBE3Q8IX30 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 AC092506.1-202ENST00000401022 528 ntBASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 RN7SL219P-201ENST00000582872 296 ntBASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ACTG1P22-201ENST00000603793 1099 ntBASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 GPR182-203ENST00000622922 591 ntBASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 AP001002.3-201ENST00000623482 206 ntBASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCUBE3Q8IX30 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 SEC63P1-201ENST00000425785 1258 ntBASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.55■□□□□ 0.08
SCUBE3Q8IX30 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms