Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 AC007541.1-201ENST00000570282 1469 ntBASIC13.77□□□□□ -0.21
TUBA1AQ71U36 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 DMBT1P1-203ENST00000636837 4628 ntBASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.77□□□□□ -0.21
TUBA1AQ71U36 NUTM2HP-201ENST00000442076 2498 ntBASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 KRT8P22-201ENST00000562317 1415 ntBASIC13.76□□□□□ -0.21
TUBA1AQ71U36 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TUBA1AQ71U36 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TUBA1AQ71U36 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms