Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.02■□□□□ 0.32
USP50Q70EL3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
USP50Q70EL3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.02■□□□□ 0.31
USP50Q70EL3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.02■□□□□ 0.31
USP50Q70EL3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.02■□□□□ 0.31
USP50Q70EL3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP50Q70EL3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.02■□□□□ 0.31
USP50Q70EL3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.02■□□□□ 0.31
USP50Q70EL3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
USP50Q70EL3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
USP50Q70EL3 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.01■□□□□ 0.31
USP50Q70EL3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
USP50Q70EL3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 AL080243.1-201ENST00000423293 1060 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 AP000244.1-201ENST00000424582 201 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.01■□□□□ 0.31
USP50Q70EL3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 RN7SL128P-201ENST00000467883 305 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 RN7SL147P-201ENST00000487345 298 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 TYMSP2-201ENST00000589501 424 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 AC020658.6-201ENST00000623564 1870 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 LINC00528-201ENST00000600723 2160 ntBASIC17.01■□□□□ 0.31
USP50Q70EL3 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.01■□□□□ 0.31
USP50Q70EL3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP50Q70EL3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17■□□□□ 0.31
USP50Q70EL3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP50Q70EL3 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
USP50Q70EL3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17■□□□□ 0.31
USP50Q70EL3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 AC106827.1-201ENST00000366454 431 ntBASIC17■□□□□ 0.31
USP50Q70EL3 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17■□□□□ 0.31
USP50Q70EL3 HNRNPA1P56-201ENST00000505767 954 ntBASIC17■□□□□ 0.31
USP50Q70EL3 EEF1GP8-201ENST00000506566 1154 ntBASIC17■□□□□ 0.31
USP50Q70EL3 AC005740.1-201ENST00000515639 522 ntBASIC17■□□□□ 0.31
USP50Q70EL3 RN7SKP155-201ENST00000516031 288 ntBASIC17■□□□□ 0.31
USP50Q70EL3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 FBXO36P1-201ENST00000579006 471 ntBASIC17■□□□□ 0.31
USP50Q70EL3 MIR4265-201ENST00000582152 99 ntBASIC17■□□□□ 0.31
USP50Q70EL3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17■□□□□ 0.31
USP50Q70EL3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
USP50Q70EL3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP50Q70EL3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms