Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KRT18P43-201ENST00000469825 1281 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 MEIS3P1-201ENST00000495167 958 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC092337.1-201ENST00000568699 1129 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC009118.2-201ENST00000613275 655 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC112693.3-201ENST00000624819 1983 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 VENTXP1-201ENST00000569334 2716 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AC114271.1-201ENST00000612689 2813 ntBASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AC105250.1-201ENST00000509378 2057 ntBASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AL133267.1-201ENST00000398220 340 ntBASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AL355385.1-201ENST00000606123 409 ntBASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AC004840.1-201ENST00000636359 365 ntBASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM53Q6P2H8 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RPL5P21-201ENST00000404620 815 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 KRT18P64-201ENST00000434946 1219 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms