Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNA1P78396 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.65■□□□□ 0.26
CCNA1P78396 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.64■□□□□ 0.26
CCNA1P78396 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCNA1P78396 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.64■□□□□ 0.26
CCNA1P78396 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNA1P78396 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCNA1P78396 CICP6-201ENST00000457191 2729 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNA1P78396 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCNA1P78396 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 RPL13AP19-201ENST00000434320 584 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 AL354861.1-201ENST00000445213 355 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 LYPLA2P1-203ENST00000447689 696 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 AL157792.1-201ENST00000488281 530 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCNA1P78396 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNA1P78396 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.64■□□□□ 0.25
CCNA1P78396 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNA1P78396 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.64■□□□□ 0.25
CCNA1P78396 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNA1P78396 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNA1P78396 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCNA1P78396 AC084781.1-201ENST00000613737 656 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNA1P78396 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCNA1P78396 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNA1P78396 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCNA1P78396 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.64■□□□□ 0.25
CCNA1P78396 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCNA1P78396 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNA1P78396 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.64■□□□□ 0.25
CCNA1P78396 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCNA1P78396 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.63■□□□□ 0.25
CCNA1P78396 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.63■□□□□ 0.25
CCNA1P78396 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.63■□□□□ 0.25
CCNA1P78396 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.63■□□□□ 0.25
CCNA1P78396 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.63■□□□□ 0.25
CCNA1P78396 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 MIR3180-2-201ENST00000581748 88 ntBASIC16.63■□□□□ 0.25
CCNA1P78396 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.63■□□□□ 0.25
CCNA1P78396 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 AP000322.3-201ENST00000608665 388 ntBASIC16.63■□□□□ 0.25
CCNA1P78396 AC105137.3-201ENST00000617588 984 ntBASIC16.63■□□□□ 0.25
CCNA1P78396 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms