Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.41□□□□□ -0.1
YBX1P67809 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.41□□□□□ -0.1
YBX1P67809 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.41□□□□□ -0.1
YBX1P67809 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.41□□□□□ -0.1
YBX1P67809 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.41□□□□□ -0.1
YBX1P67809 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 FTLP10-202ENST00000505798 471 ntBASIC14.41□□□□□ -0.1
YBX1P67809 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.41□□□□□ -0.1
YBX1P67809 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 AC133552.6-201ENST00000613406 534 ntBASIC14.41□□□□□ -0.1
YBX1P67809 MIR6805-201ENST00000615055 62 ntBASIC14.41□□□□□ -0.1
YBX1P67809 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.41□□□□□ -0.1
YBX1P67809 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 AL137784.3-201ENST00000623858 2288 ntBASIC14.41□□□□□ -0.1
YBX1P67809 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 AHCYP2-201ENST00000430630 1300 ntBASIC14.41□□□□□ -0.1
YBX1P67809 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 AC105206.1-202ENST00000314927 2368 ntBASIC14.4□□□□□ -0.1
YBX1P67809 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.4□□□□□ -0.1
YBX1P67809 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.4□□□□□ -0.1
YBX1P67809 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.4□□□□□ -0.1
YBX1P67809 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.4□□□□□ -0.1
YBX1P67809 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.4□□□□□ -0.1
YBX1P67809 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.4□□□□□ -0.1
YBX1P67809 AC007969.1-201ENST00000433675 447 ntBASIC14.4□□□□□ -0.1
YBX1P67809 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.4□□□□□ -0.1
YBX1P67809 AC007274.1-201ENST00000439805 662 ntBASIC14.4□□□□□ -0.1
YBX1P67809 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.4□□□□□ -0.1
YBX1P67809 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.4□□□□□ -0.1
YBX1P67809 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.4□□□□□ -0.1
YBX1P67809 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.4□□□□□ -0.1
YBX1P67809 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.4□□□□□ -0.1
YBX1P67809 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.4□□□□□ -0.1
YBX1P67809 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.4□□□□□ -0.1
YBX1P67809 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.4□□□□□ -0.1
YBX1P67809 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
YBX1P67809 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
YBX1P67809 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.4□□□□□ -0.1
YBX1P67809 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
YBX1P67809 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
YBX1P67809 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YBX1P67809 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.39□□□□□ -0.11
YBX1P67809 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms