Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 AGAP12P-201ENST00000585227 2359 ntBASIC12.2□□□□□ -0.46
SUPT4H1P63272 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.2□□□□□ -0.46
SUPT4H1P63272 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 AC007969.1-201ENST00000433675 447 ntBASIC12.2□□□□□ -0.46
SUPT4H1P63272 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 HLA-V-204ENST00000476601 1289 ntBASIC12.2□□□□□ -0.46
SUPT4H1P63272 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 AL391069.4-201ENST00000609583 481 ntBASIC12.2□□□□□ -0.46
SUPT4H1P63272 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SUPT4H1P63272 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUPT4H1P63272 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 SPDYE7P-202ENST00000420373 878 ntBASIC12.19□□□□□ -0.46
SUPT4H1P63272 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AC026410.3-201ENST00000514280 936 ntBASIC12.19□□□□□ -0.46
SUPT4H1P63272 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 MTDHP5-201ENST00000598980 586 ntBASIC12.19□□□□□ -0.46
SUPT4H1P63272 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SUPT4H1P63272 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.19□□□□□ -0.46
SUPT4H1P63272 AP001059.3-201ENST00000619053 235 ntBASIC12.19□□□□□ -0.46
SUPT4H1P63272 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms