Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC005229.1-201ENST00000392885 409 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 AL138725.1-201ENST00000407347 1314 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 CLUHP2-201ENST00000426660 1303 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 BCRP2-202ENST00000447763 634 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 FTLP10-202ENST00000505798 471 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 BCRP6-201ENST00000510112 632 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 BCRP7-201ENST00000511549 544 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 SLC25A47P1-201ENST00000531577 414 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 AL596325.1-201ENST00000563991 1082 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.26□□□□□ -0.29
CLRN1P58418 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 AL022328.1-201ENST00000610050 478 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLRN1P58418 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.26□□□□□ -0.29
CLRN1P58418 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 AL138709.1-201ENST00000614840 1693 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 CU639417.3-201ENST00000624240 1404 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 FKBP4P6-201ENST00000457486 1332 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CLRN1P58418 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 POM121L8P-201ENST00000417732 1281 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 POM121L9P-203ENST00000441984 1285 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 MESTP3-201ENST00000503460 968 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 AP005018.1-201ENST00000525475 301 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.25□□□□□ -0.29
CLRN1P58418 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 AC132938.2-201ENST00000579188 680 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CLRN1P58418 AC138466.3-201ENST00000619983 221 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 AL591163.1-201ENST00000641757 987 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 AGGF1P1-201ENST00000509500 2073 ntBASIC13.25□□□□□ -0.29
CLRN1P58418 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLRN1P58418 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
CLRN1P58418 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLRN1P58418 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CLRN1P58418 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms