Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.2□□□□□ -0.14
VSX2P58304 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
VSX2P58304 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.2□□□□□ -0.14
VSX2P58304 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.2□□□□□ -0.14
VSX2P58304 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.2□□□□□ -0.14
VSX2P58304 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.2□□□□□ -0.14
VSX2P58304 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VSX2P58304 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
VSX2P58304 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.2□□□□□ -0.14
VSX2P58304 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.19□□□□□ -0.14
VSX2P58304 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.19□□□□□ -0.14
VSX2P58304 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.19□□□□□ -0.14
VSX2P58304 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 AC108725.1-201ENST00000495472 409 ntBASIC14.19□□□□□ -0.14
VSX2P58304 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.19□□□□□ -0.14
VSX2P58304 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.19□□□□□ -0.14
VSX2P58304 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.19□□□□□ -0.14
VSX2P58304 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 AL096828.3-201ENST00000615354 462 ntBASIC14.19□□□□□ -0.14
VSX2P58304 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.19□□□□□ -0.14
VSX2P58304 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.19□□□□□ -0.14
VSX2P58304 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
VSX2P58304 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSX2P58304 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 AC007292.2-201ENST00000593524 1812 ntBASIC14.18□□□□□ -0.14
VSX2P58304 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 CICP24-201ENST00000605464 2705 ntBASIC14.18□□□□□ -0.14
VSX2P58304 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.18□□□□□ -0.14
VSX2P58304 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSX2P58304 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VSX2P58304 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms