Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SRP9P49458 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.21□□□□□ -0.29
SRP9P49458 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
SRP9P49458 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SRP9P49458 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SRP9P49458 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SRP9P49458 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SRP9P49458 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SRP9P49458 GHSR-202ENST00000427970 912 ntBASIC13.21□□□□□ -0.29
SRP9P49458 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.21□□□□□ -0.29
SRP9P49458 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 AC123567.1-201ENST00000548294 1261 ntBASIC13.21□□□□□ -0.29
SRP9P49458 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.21□□□□□ -0.29
SRP9P49458 AC004790.1-201ENST00000612686 536 ntBASIC13.21□□□□□ -0.29
SRP9P49458 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.21□□□□□ -0.29
SRP9P49458 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.21□□□□□ -0.29
SRP9P49458 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.21□□□□□ -0.29
SRP9P49458 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SRP9P49458 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SRP9P49458 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.21□□□□□ -0.3
SRP9P49458 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SRP9P49458 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.21□□□□□ -0.3
SRP9P49458 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SRP9P49458 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
SRP9P49458 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SRP9P49458 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 AC055811.4-201ENST00000624039 1754 ntBASIC13.2□□□□□ -0.3
SRP9P49458 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms