Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6CP48668 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 AC136759.1-202ENST00000530858 2194 ntBASIC14.41□□□□□ -0.1
KRT6CP48668 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.41□□□□□ -0.1
KRT6CP48668 ELK1P1-201ENST00000485699 580 ntBASIC14.41□□□□□ -0.1
KRT6CP48668 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
KRT6CP48668 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 AL136172.1-201ENST00000598590 1394 ntBASIC14.41□□□□□ -0.1
KRT6CP48668 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.41□□□□□ -0.1
KRT6CP48668 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KRT6CP48668 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRT6CP48668 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 AL031595.1-201ENST00000623969 4709 ntBASIC14.4□□□□□ -0.1
KRT6CP48668 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
KRT6CP48668 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.4□□□□□ -0.1
KRT6CP48668 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 API5-211ENST00000534695 560 ntTSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.4□□□□□ -0.1
KRT6CP48668 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.4□□□□□ -0.1
KRT6CP48668 CLUHP6-201ENST00000580789 941 ntBASIC14.4□□□□□ -0.1
KRT6CP48668 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KRT6CP48668 LINC02560-201ENST00000596379 459 ntBASIC14.4□□□□□ -0.1
KRT6CP48668 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRT6CP48668 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
KRT6CP48668 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms