Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AL391647.1-201ENST00000395664 511 ntBASIC9.64□□□□□ -0.87
PCP4P48539 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC9.64□□□□□ -0.87
PCP4P48539 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
PCP4P48539 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 AL356652.1-201ENST00000615962 565 ntBASIC9.64□□□□□ -0.87
PCP4P48539 PFAS-212ENST00000625942 396 ntTSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 AC067863.2-201ENST00000559120 1980 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 AC020910.6-201ENST00000623084 1459 ntBASIC9.64□□□□□ -0.87
PCP4P48539 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 EPM2A-217ENST00000639423 2886 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 IL7-201ENST00000263851 2076 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 TUBD1-201ENST00000325752 2490 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 PALB2-206ENST00000568219 3963 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 ADAM1A-201ENST00000424240 2129 ntBASIC9.63□□□□□ -0.87
PCP4P48539 NME1-207ENST00000480143 964 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC9.63□□□□□ -0.87
PCP4P48539 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 SIPA1L2-202ENST00000308942 2937 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 OTOF-201ENST00000272371 7156 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC9.63□□□□□ -0.87
PCP4P48539 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 DDC-214ENST00000622873 1839 ntTSL 3 BASIC9.63□□□□□ -0.87
PCP4P48539 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 CASP7-204ENST00000369321 2620 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC9.63□□□□□ -0.87
PCP4P48539 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC9.63□□□□□ -0.87
PCP4P48539 FMN1-201ENST00000320930 3930 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PCP4P48539 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 AL512378.1-201ENST00000394808 2100 ntBASIC9.62□□□□□ -0.87
PCP4P48539 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
PCP4P48539 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC9.62□□□□□ -0.87
PCP4P48539 PRIMA1-203ENST00000393143 3649 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC9.62□□□□□ -0.87
PCP4P48539 PATJ-215ENST00000635137 2298 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 AL391121.1-201ENST00000607967 1349 ntBASIC9.62□□□□□ -0.87
PCP4P48539 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC9.62□□□□□ -0.87
PCP4P48539 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
PCP4P48539 PAX6-243ENST00000638903 2620 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
PCP4P48539 CAMK2G-202ENST00000322635 3720 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms