RNA–Protein interactions for RNA: ENST00000393143.5

PRIMA1-203, Transcript of proline rich membrane anchor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIMA1, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-203ENST00000393143 NISCHQ9Y2I1 1504 aa21.23■□□□□ 0.99
PRIMA1-203ENST00000393143 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
PRIMA1-203ENST00000393143 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
PRIMA1-203ENST00000393143 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
PRIMA1-203ENST00000393143 PCGF6Q9BYE7 350 aa18.86■□□□□ 0.61
PRIMA1-203ENST00000393143 HRCP23327 699 aa18.7■□□□□ 0.58
PRIMA1-203ENST00000393143 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
PRIMA1-203ENST00000393143 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
PRIMA1-203ENST00000393143 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
PRIMA1-203ENST00000393143 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
PRIMA1-203ENST00000393143 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
PRIMA1-203ENST00000393143 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
PRIMA1-203ENST00000393143 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
PRIMA1-203ENST00000393143 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.46
PRIMA1-203ENST00000393143 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
PRIMA1-203ENST00000393143 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
PRIMA1-203ENST00000393143 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
PRIMA1-203ENST00000393143 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
PRIMA1-203ENST00000393143 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
PRIMA1-203ENST00000393143 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
PRIMA1-203ENST00000393143 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
PRIMA1-203ENST00000393143 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
PRIMA1-203ENST00000393143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
PRIMA1-203ENST00000393143 YTHDC1Q96MU7 727 aaKnown RBP17.41■□□□□ 0.38
PRIMA1-203ENST00000393143 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
PRIMA1-203ENST00000393143 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
PRIMA1-203ENST00000393143 NEUROD1Q13562 356 aa17.33■□□□□ 0.37
PRIMA1-203ENST00000393143 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
PRIMA1-203ENST00000393143 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
PRIMA1-203ENST00000393143 ABCC9O60706 1549 aa17.22■□□□□ 0.35
PRIMA1-203ENST00000393143 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
PRIMA1-203ENST00000393143 UBTFP17480 764 aaKnown RBP17.08■□□□□ 0.32
PRIMA1-203ENST00000393143 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
PRIMA1-203ENST00000393143 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.31
PRIMA1-203ENST00000393143 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
PRIMA1-203ENST00000393143 MYT1Q01538 1121 aa16.98■□□□□ 0.31
PRIMA1-203ENST00000393143 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
PRIMA1-203ENST00000393143 APLP2Q06481 763 aa16.88■□□□□ 0.29
PRIMA1-203ENST00000393143 MIER1Q8N108 512 aa16.83■□□□□ 0.28
PRIMA1-203ENST00000393143 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
PRIMA1-203ENST00000393143 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
PRIMA1-203ENST00000393143 NACADO15069 1562 aa16.67■□□□□ 0.26
PRIMA1-203ENST00000393143 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
PRIMA1-203ENST00000393143 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
PRIMA1-203ENST00000393143 ITGAEP38570 1179 aa16.6■□□□□ 0.25
PRIMA1-203ENST00000393143 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRIMA1-203ENST00000393143 BCANQ96GW7 911 aa16.58■□□□□ 0.24
PRIMA1-203ENST00000393143 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
PRIMA1-203ENST00000393143 WIZO95785 1651 aa16.53■□□□□ 0.24
PRIMA1-203ENST00000393143 SOGA1O94964 1423 aa16.47■□□□□ 0.23
PRIMA1-203ENST00000393143 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
PRIMA1-203ENST00000393143 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
PRIMA1-203ENST00000393143 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
PRIMA1-203ENST00000393143 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
PRIMA1-203ENST00000393143 ATP1B4Q9UN42 357 aaPredicted RBP16.34■□□□□ 0.21
PRIMA1-203ENST00000393143 NEFLP07196 543 aa16.33■□□□□ 0.21
PRIMA1-203ENST00000393143 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
PRIMA1-203ENST00000393143 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
PRIMA1-203ENST00000393143 FKBP8Q14318 412 aa16.29■□□□□ 0.2
PRIMA1-203ENST00000393143 BAZ1AQ9NRL2 1556 aaPredicted RBP16.27■□□□□ 0.2
PRIMA1-203ENST00000393143 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
PRIMA1-203ENST00000393143 CLIP1P30622 1438 aa16.25■□□□□ 0.19
PRIMA1-203ENST00000393143 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
PRIMA1-203ENST00000393143 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
PRIMA1-203ENST00000393143 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
PRIMA1-203ENST00000393143 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
PRIMA1-203ENST00000393143 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
PRIMA1-203ENST00000393143 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
PRIMA1-203ENST00000393143 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
PRIMA1-203ENST00000393143 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
PRIMA1-203ENST00000393143 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
PRIMA1-203ENST00000393143 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
PRIMA1-203ENST00000393143 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
PRIMA1-203ENST00000393143 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
PRIMA1-203ENST00000393143 EEA1Q15075 1411 aa16.11■□□□□ 0.17
PRIMA1-203ENST00000393143 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
PRIMA1-203ENST00000393143 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
PRIMA1-203ENST00000393143 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
PRIMA1-203ENST00000393143 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
PRIMA1-203ENST00000393143 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
PRIMA1-203ENST00000393143 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
PRIMA1-203ENST00000393143 ANP32CO43423 234 aa16.03■□□□□ 0.16
PRIMA1-203ENST00000393143 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
PRIMA1-203ENST00000393143 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.16
PRIMA1-203ENST00000393143 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
PRIMA1-203ENST00000393143 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.15
PRIMA1-203ENST00000393143 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
PRIMA1-203ENST00000393143 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
PRIMA1-203ENST00000393143 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
PRIMA1-203ENST00000393143 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
PRIMA1-203ENST00000393143 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRIMA1-203ENST00000393143 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
PRIMA1-203ENST00000393143 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
PRIMA1-203ENST00000393143 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
PRIMA1-203ENST00000393143 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
PRIMA1-203ENST00000393143 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
PRIMA1-203ENST00000393143 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
PRIMA1-203ENST00000393143 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
PRIMA1-203ENST00000393143 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
PRIMA1-203ENST00000393143 KIF21BO75037 1637 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms