Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
GABRA4P48169 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 RN7SKP214-201ENST00000364208 315 ntBASIC13.94□□□□□ -0.18
GABRA4P48169 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GABRA4P48169 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GABRA4P48169 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GABRA4P48169 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 RCC2P8-201ENST00000502779 1035 ntBASIC13.94□□□□□ -0.18
GABRA4P48169 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.94□□□□□ -0.18
GABRA4P48169 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.94□□□□□ -0.18
GABRA4P48169 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.94□□□□□ -0.18
GABRA4P48169 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
GABRA4P48169 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 AC003686.1-201ENST00000550956 1034 ntBASIC13.94□□□□□ -0.18
GABRA4P48169 CHMP4BP1-201ENST00000556017 588 ntBASIC13.94□□□□□ -0.18
GABRA4P48169 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.94□□□□□ -0.18
GABRA4P48169 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GABRA4P48169 AC138627.1-207ENST00000641560 1006 ntBASIC13.94□□□□□ -0.18
GABRA4P48169 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
GABRA4P48169 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.94□□□□□ -0.18
GABRA4P48169 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 AC008132.1-202ENST00000342005 1389 ntBASIC13.94□□□□□ -0.18
GABRA4P48169 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.94□□□□□ -0.18
GABRA4P48169 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.94□□□□□ -0.18
GABRA4P48169 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.93□□□□□ -0.18
GABRA4P48169 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.93□□□□□ -0.18
GABRA4P48169 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.93□□□□□ -0.18
GABRA4P48169 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
GABRA4P48169 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 SLC25A24P2-201ENST00000415059 510 ntBASIC13.93□□□□□ -0.18
GABRA4P48169 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.93□□□□□ -0.18
GABRA4P48169 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 XBP1P1-201ENST00000436573 652 ntBASIC13.93□□□□□ -0.18
GABRA4P48169 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.93□□□□□ -0.18
GABRA4P48169 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.93□□□□□ -0.18
GABRA4P48169 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.93□□□□□ -0.18
GABRA4P48169 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.93□□□□□ -0.18
GABRA4P48169 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABRA4P48169 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms