Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 AP001267.2-201ENST00000532619 2086 ntBASIC13.38□□□□□ -0.27
APOBEC1P41238 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
APOBEC1P41238 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOBEC1P41238 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOBEC1P41238 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 AL590440.2-201ENST00000641973 1595 ntBASIC13.37□□□□□ -0.27
APOBEC1P41238 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 BX640514.1-201ENST00000583223 1918 ntBASIC13.37□□□□□ -0.27
APOBEC1P41238 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.37□□□□□ -0.27
APOBEC1P41238 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 AC007191.1-201ENST00000623179 2995 ntBASIC13.37□□□□□ -0.27
APOBEC1P41238 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.37□□□□□ -0.27
APOBEC1P41238 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
APOBEC1P41238 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
APOBEC1P41238 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.37□□□□□ -0.27
APOBEC1P41238 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOBEC1P41238 AL358472.3-201ENST00000608147 415 ntBASIC13.37□□□□□ -0.27
APOBEC1P41238 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
APOBEC1P41238 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.37□□□□□ -0.27
APOBEC1P41238 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOBEC1P41238 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 AC015656.1-201ENST00000624209 3578 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 KHSRPP1-201ENST00000427983 1768 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms