Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM5CP41229 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM5CP41229 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM5CP41229 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
KDM5CP41229 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC21.47■■□□□ 1.03
KDM5CP41229 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
KDM5CP41229 PSAT1P2-201ENST00000426107 972 ntBASIC21.47■■□□□ 1.03
KDM5CP41229 AL161932.2-201ENST00000435436 679 ntBASIC21.47■■□□□ 1.03
KDM5CP41229 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM5CP41229 RPS18P9-201ENST00000482817 460 ntBASIC21.47■■□□□ 1.03
KDM5CP41229 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.47■■□□□ 1.03
KDM5CP41229 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC21.47■■□□□ 1.03
KDM5CP41229 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.47■■□□□ 1.03
KDM5CP41229 AC090136.2-201ENST00000517809 420 ntBASIC21.47■■□□□ 1.03
KDM5CP41229 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KDM5CP41229 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM5CP41229 AL160191.2-201ENST00000603975 601 ntBASIC21.47■■□□□ 1.03
KDM5CP41229 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM5CP41229 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC21.47■■□□□ 1.03
KDM5CP41229 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM5CP41229 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
KDM5CP41229 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC21.46■■□□□ 1.03
KDM5CP41229 IGHEP2-201ENST00000519308 1256 ntBASIC21.46■■□□□ 1.03
KDM5CP41229 NAV1-210ENST00000593583 726 ntBASIC21.46■■□□□ 1.03
KDM5CP41229 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KDM5CP41229 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC21.46■■□□□ 1.03
KDM5CP41229 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC21.46■■□□□ 1.03
KDM5CP41229 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC21.46■■□□□ 1.03
KDM5CP41229 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
KDM5CP41229 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC21.46■■□□□ 1.03
KDM5CP41229 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
KDM5CP41229 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KDM5CP41229 MPI-203ENST00000535694 1523 ntTSL 2 BASIC21.46■■□□□ 1.03
KDM5CP41229 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.45■■□□□ 1.02
KDM5CP41229 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC21.45■■□□□ 1.02
KDM5CP41229 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
KDM5CP41229 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
KDM5CP41229 AC073210.1-201ENST00000414799 232 ntBASIC21.45■■□□□ 1.02
KDM5CP41229 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
KDM5CP41229 AC092573.1-201ENST00000433054 884 ntBASIC21.45■■□□□ 1.02
KDM5CP41229 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC21.45■■□□□ 1.02
KDM5CP41229 AC145285.5-201ENST00000562217 361 ntBASIC21.45■■□□□ 1.02
KDM5CP41229 AC018846.1-201ENST00000568231 183 ntBASIC21.45■■□□□ 1.02
KDM5CP41229 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC21.45■■□□□ 1.02
KDM5CP41229 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC21.45■■□□□ 1.02
KDM5CP41229 AGAP7P-201ENST00000582299 2062 ntBASIC21.45■■□□□ 1.02
KDM5CP41229 AGAP14-201ENST00000624701 2060 ntBASIC21.45■■□□□ 1.02
KDM5CP41229 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC21.45■■□□□ 1.02
KDM5CP41229 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
KDM5CP41229 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 AC092570.1-201ENST00000414446 469 ntBASIC21.44■■□□□ 1.02
KDM5CP41229 HNRNPA1P2-207ENST00000432375 960 ntBASIC21.44■■□□□ 1.02
KDM5CP41229 AC092896.1-201ENST00000465850 380 ntBASIC21.44■■□□□ 1.02
KDM5CP41229 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 AL136982.5-201ENST00000605222 294 ntBASIC21.44■■□□□ 1.02
KDM5CP41229 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
KDM5CP41229 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KDM5CP41229 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC21.44■■□□□ 1.02
KDM5CP41229 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms