Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AP000845.1-201ENST00000581677 2131 ntBASIC14.16□□□□□ -0.14
KRT20P35900 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.16□□□□□ -0.14
KRT20P35900 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KRT20P35900 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.16□□□□□ -0.14
KRT20P35900 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.16□□□□□ -0.14
KRT20P35900 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.16□□□□□ -0.14
KRT20P35900 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KRT20P35900 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KRT20P35900 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.16□□□□□ -0.14
KRT20P35900 AC007787.1-201ENST00000588095 1583 ntBASIC14.16□□□□□ -0.14
KRT20P35900 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KRT20P35900 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT20P35900 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.16□□□□□ -0.14
KRT20P35900 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.16□□□□□ -0.14
KRT20P35900 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.15□□□□□ -0.14
KRT20P35900 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 AC152010.1-201ENST00000415779 2006 ntBASIC14.15□□□□□ -0.14
KRT20P35900 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 AC107918.4-201ENST00000641966 3141 ntBASIC14.15□□□□□ -0.14
KRT20P35900 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KRT20P35900 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.15□□□□□ -0.14
KRT20P35900 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KRT20P35900 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.15□□□□□ -0.14
KRT20P35900 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 KRT18P25-201ENST00000508931 1278 ntBASIC14.15□□□□□ -0.14
KRT20P35900 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.15□□□□□ -0.14
KRT20P35900 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.15□□□□□ -0.14
KRT20P35900 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.15□□□□□ -0.14
KRT20P35900 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.15□□□□□ -0.14
KRT20P35900 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT20P35900 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT20P35900 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
KRT20P35900 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.15□□□□□ -0.15
KRT20P35900 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
KRT20P35900 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KRT20P35900 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT20P35900 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT20P35900 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms