Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCN1P35523 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 AC010326.4-201ENST00000604665 891 ntBASIC16.89■□□□□ 0.29
CLCN1P35523 AC079781.4-201ENST00000641908 219 ntBASIC16.89■□□□□ 0.29
CLCN1P35523 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLCN1P35523 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCN1P35523 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 CETN4P-206ENST00000642099 2168 ntBASIC16.89■□□□□ 0.29
CLCN1P35523 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCN1P35523 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CLCN1P35523 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCN1P35523 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLCN1P35523 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLCN1P35523 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCN1P35523 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 TUBB3P1-201ENST00000405796 1332 ntBASIC16.88■□□□□ 0.29
CLCN1P35523 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 DMBT1P1-203ENST00000636837 4628 ntBASIC16.88■□□□□ 0.29
CLCN1P35523 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLCN1P35523 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCN1P35523 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCN1P35523 AC072061.1-201ENST00000569710 2234 ntBASIC16.88■□□□□ 0.29
CLCN1P35523 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLCN1P35523 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLCN1P35523 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCN1P35523 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 AC074338.1-201ENST00000416825 156 ntBASIC16.87■□□□□ 0.29
CLCN1P35523 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLCN1P35523 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCN1P35523 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCN1P35523 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCN1P35523 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCN1P35523 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms