Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 FAM197Y7-201ENST00000432892 766 ntBASIC15.62■□□□□ 0.09
RFC1P35251 C2orf27AP3-201ENST00000434123 579 ntBASIC15.62■□□□□ 0.09
RFC1P35251 AC016694.1-201ENST00000434179 700 ntBASIC15.62■□□□□ 0.09
RFC1P35251 AC007551.1-201ENST00000457394 519 ntBASIC15.62■□□□□ 0.09
RFC1P35251 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC1P35251 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC1P35251 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC1P35251 AL354718.3-201ENST00000616414 581 ntBASIC15.62■□□□□ 0.09
RFC1P35251 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.62■□□□□ 0.09
RFC1P35251 CR382287.1-201ENST00000623954 586 ntBASIC15.62■□□□□ 0.09
RFC1P35251 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFC1P35251 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC1P35251 MRPL37P1-201ENST00000592451 1337 ntBASIC15.62■□□□□ 0.09
RFC1P35251 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC1P35251 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC1P35251 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 AP000593.2-201ENST00000542775 1433 ntBASIC15.61■□□□□ 0.09
RFC1P35251 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 LINC01230-201ENST00000625222 3017 ntBASIC15.61■□□□□ 0.09
RFC1P35251 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 CNN2P8-201ENST00000421872 913 ntBASIC15.61■□□□□ 0.09
RFC1P35251 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 AP003171.2-201ENST00000528208 925 ntBASIC15.61■□□□□ 0.09
RFC1P35251 CR383656.12-201ENST00000549567 513 ntBASIC15.61■□□□□ 0.09
RFC1P35251 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 AC106820.3-201ENST00000561653 397 ntBASIC15.61■□□□□ 0.09
RFC1P35251 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.61■□□□□ 0.09
RFC1P35251 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
RFC1P35251 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC1P35251 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RFC1P35251 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC1P35251 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFC1P35251 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFC1P35251 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RFC1P35251 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RFC1P35251 AC027601.5-201ENST00000624065 2482 ntBASIC15.6■□□□□ 0.09
RFC1P35251 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RFC1P35251 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RFC1P35251 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RFC1P35251 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RFC1P35251 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC1P35251 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.6■□□□□ 0.09
RFC1P35251 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms