Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 LINC02228-204ENST00000642115 2962 ntBASIC15.11■□□□□ 0.01
SLC6A4P31645 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 AC005077.2-201ENST00000449786 690 ntBASIC15.11■□□□□ 0.01
SLC6A4P31645 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC6A4P31645 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A4P31645 MARK2P5-201ENST00000507649 634 ntBASIC15.11■□□□□ 0.01
SLC6A4P31645 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC6A4P31645 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC6A4P31645 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 AP000346.4-201ENST00000614827 381 ntBASIC15.11■□□□□ 0.01
SLC6A4P31645 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SLC6A4P31645 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.11■□□□□ 0.01
SLC6A4P31645 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC6A4P31645 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC6A4P31645 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC6A4P31645 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A4P31645 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A4P31645 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A4P31645 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A4P31645 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 AC009093.10-201ENST00000641956 1442 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A4P31645 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 AC106881.1-201ENST00000605849 3329 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC6A4P31645 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 BCYRN1-201ENST00000418539 200 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A4P31645 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A4P31645 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A4P31645 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 RBM8B-201ENST00000555532 525 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A4P31645 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A4P31645 NDUFV2P1-201ENST00000596415 907 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 AC026740.1-201ENST00000607068 791 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC6A4P31645 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 TUBBP5-203ENST00000508529 1334 ntBASIC15.1■□□□□ 0.01
SLC6A4P31645 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A4P31645 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A4P31645 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A4P31645 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A4P31645 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC6A4P31645 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms