Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TBC1D3P6-201ENST00000505954 962 ntBASIC18.78■□□□□ 0.6
RXRBP28702 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RXRBP28702 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RXRBP28702 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RXRBP28702 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RXRBP28702 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RXRBP28702 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.78■□□□□ 0.6
RXRBP28702 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
RXRBP28702 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.77■□□□□ 0.6
RXRBP28702 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.77■□□□□ 0.6
RXRBP28702 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 KRT8P18-201ENST00000413425 1445 ntBASIC18.77■□□□□ 0.6
RXRBP28702 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
RXRBP28702 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 RN7SL684P-201ENST00000465665 294 ntBASIC18.77■□□□□ 0.6
RXRBP28702 MARK2P17-201ENST00000498560 841 ntBASIC18.77■□□□□ 0.6
RXRBP28702 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 HNRNPA1P72-201ENST00000529511 967 ntBASIC18.77■□□□□ 0.6
RXRBP28702 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RXRBP28702 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC18.77■□□□□ 0.6
RXRBP28702 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.77■□□□□ 0.6
RXRBP28702 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RXRBP28702 LINC02447-202ENST00000501888 2146 ntBASIC18.77■□□□□ 0.6
RXRBP28702 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RXRBP28702 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RXRBP28702 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RXRBP28702 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RXRBP28702 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RXRBP28702 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
RXRBP28702 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RXRBP28702 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.77■□□□□ 0.59
RXRBP28702 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.76■□□□□ 0.59
RXRBP28702 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RXRBP28702 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.76■□□□□ 0.59
RXRBP28702 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RXRBP28702 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RXRBP28702 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.76■□□□□ 0.59
RXRBP28702 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 WDR54-202ENST00000409791 854 ntTSL 3 BASIC18.76■□□□□ 0.59
RXRBP28702 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC18.76■□□□□ 0.59
RXRBP28702 AC000077.1-201ENST00000420012 953 ntBASIC18.76■□□□□ 0.59
RXRBP28702 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.76■□□□□ 0.59
RXRBP28702 AC079325.1-201ENST00000430386 857 ntBASIC18.76■□□□□ 0.59
RXRBP28702 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC18.76■□□□□ 0.59
RXRBP28702 AC005740.1-201ENST00000515639 522 ntBASIC18.76■□□□□ 0.59
RXRBP28702 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC18.76■□□□□ 0.59
RXRBP28702 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC18.76■□□□□ 0.59
RXRBP28702 ABCD1P3-201ENST00000562927 605 ntBASIC18.76■□□□□ 0.59
RXRBP28702 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC18.76■□□□□ 0.59
RXRBP28702 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.76■□□□□ 0.59
RXRBP28702 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC18.76■□□□□ 0.59
RXRBP28702 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.76■□□□□ 0.59
RXRBP28702 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 AP003680.1-201ENST00000598970 3660 ntBASIC18.76■□□□□ 0.59
RXRBP28702 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RXRBP28702 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RXRBP28702 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 PCDHB19P-201ENST00000570871 2371 ntBASIC18.75■□□□□ 0.59
RXRBP28702 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC18.75■□□□□ 0.59
RXRBP28702 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RXRBP28702 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.75■□□□□ 0.59
RXRBP28702 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RXRBP28702 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18.75■□□□□ 0.59
RXRBP28702 AC103563.1-201ENST00000429316 123 ntBASIC18.75■□□□□ 0.59
RXRBP28702 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC18.75■□□□□ 0.59
RXRBP28702 RPL29P2-201ENST00000488409 460 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms